PH01001898G0240's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT1G15490 : 4.00E-180
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01001898
Strand: -
| Region | Start | End |
| gene | 170469 | 175626 |
| mRNA | 170469 | 175626 |
| exon | 170469 | 171209 |
| exon | 171386 | 171586 |
| exon | 171909 | 172112 |
| exon | 172242 | 172370 |
| exon | 172881 | 173597 |
| exon | 173712 | 174019 |
| exon | 174533 | 175626 |
| CDS | 171084 | 171209 |
| CDS | 171386 | 171586 |
| CDS | 171909 | 172112 |
| CDS | 172242 | 172370 |
| CDS | 172881 | 173597 |
| CDS | 173712 | 174019 |
| CDS | 174533 | 174800 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 370 | 629 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.