PH01001900G0270's details annotation
1.Annotation
ICBR annotation: S-locus-like receptor protein kinase, putative, expressed
Blast result AT4G00340 : 4.60E-89
Blast annotation: receptor-like protein kinase 4
2.Location
Scaffold: PH01001900
Strand: +
| Region | Start | End |
| gene | 177872 | 181149 |
| mRNA | 177872 | 181149 |
| exon | 177872 | 181149 |
| CDS | 178044 | 180497 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01453.23 | B_lectin | 80 | 172 |
| PF00954.19 | S_locus_glycop | 249 | 319 |
| PF00024.25 | PAN_1 | 343 | 394 |
| PF00069.24 | Pkinase | 530 | 804 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
| GO:0048544 | recognition of pollen |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.