PH01001902G0090's details annotation
1.Annotation
ICBR annotation: histidine-containing phosphotransfer protein, putative, expressed
Blast result AT3G21510 : 6.00E-32
Blast annotation: histidine-containing phosphotransmitter 1
2.Location
Scaffold: PH01001902
Strand: -
| Region | Start | End |
| gene | 58649 | 63591 |
| mRNA | 58649 | 63591 |
| exon | 58649 | 59380 |
| exon | 60077 | 60149 |
| exon | 61125 | 61196 |
| exon | 61627 | 61677 |
| exon | 62979 | 63047 |
| exon | 63152 | 63282 |
| exon | 63418 | 63591 |
| CDS | 59342 | 59380 |
| CDS | 60077 | 60149 |
| CDS | 61125 | 61196 |
| CDS | 61627 | 61677 |
| CDS | 62979 | 63047 |
| CDS | 63152 | 63282 |
| CDS | 63418 | 63474 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000160 | phosphorelay signal transduction system |
| GO:0004871 | signal transducer activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.