PH01001912G0330's details annotation
1.Annotation
ICBR annotation: glutaredoxin, putative, expressed
Blast result AT5G06470 : 2.40E-39
Blast annotation: Glutaredoxin family protein
2.Location
Scaffold: PH01001912
Strand: +
| Region | Start | End |
| gene | 236363 | 238865 |
| mRNA | 236363 | 238865 |
| exon | 236363 | 238865 |
| CDS | 236749 | 237513 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000328 | amino_acid_transmembrane_transport amino acid transmembrane transporter activity, cell redox homeostasis, |
| coexpression network | CFinderM000514 | cell redox homeostasis, protein disulfide oxidoreductase activity, nitrogen compound metabolic process, electron carrier activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00462.23 | Glutaredoxin | 110 | 173 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009055 | electron carrier activity |
| GO:0015035 | protein disulfide oxidoreductase activity |
| GO:0045454 | cell redox homeostasis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.