PH01001928G0090's details annotation
1.Annotation
ICBR annotation: plant-specific domain TIGR01627 family protein, expressed
Blast result AT1G33800 : 1.20E-27
Blast annotation: Protein of unknown function (DUF579)
2.Location
Scaffold: PH01001928
Strand: +
| Region | Start | End |
| gene | 53865 | 56359 |
| mRNA | 53865 | 56359 |
| exon | 53865 | 54723 |
| exon | 55560 | 56359 |
| CDS | 54346 | 54723 |
| CDS | 55560 | 55676 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04669.12 | Polysacc_synt_4 | 77 | 126 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.