Gene details

Annotation of co-expression genes

PH01001950G0130's details annotation

1.Annotation

ICBR annotation: homeobox domain containing protein, expressed

Blast result AT4G03090 : 7.00E-106
Blast annotation: sequence-specific DNA binding;sequence-specific DNA binding transcription factors

2.Location

Scaffold: PH01001950
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000624	proton-transporting two-sector ATPase complex, proton-transporting domain, proton-transporting V-type ATPase, V0 domain, ATP hydrolysis coupled proton transport, hydrogen ion transmembrane transporter activity, HB-other Transcription_Regulator(from PlantTFDB)
coexpression network	CFinderM000705	HB-other Transcription_Regulator(from PlantTFDB) Protein_processing_in_endoplasmic_reticulum
coexpression network	CFinderM001796	HB-other Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Transcription_Regulator(from PlantTFDB)	HB-other

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
null	null	null	null

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0006355	regulation of transcription, DNA-dependent
GO:0043565	sequence-specific DNA binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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