PH01001962G0270's details annotation
1.Annotation
ICBR annotation: CENP-C1, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001962
Strand: +
| Region | Start | End |
| gene | 183340 | 188186 |
| mRNA | 183340 | 188186 |
| exon | 183340 | 183837 |
| exon | 184102 | 184274 |
| exon | 184436 | 184521 |
| exon | 184601 | 184703 |
| exon | 185070 | 185272 |
| exon | 185357 | 185961 |
| exon | 186059 | 186173 |
| exon | 186307 | 186337 |
| exon | 186908 | 186942 |
| exon | 187801 | 187883 |
| exon | 188045 | 188186 |
| CDS | 183691 | 183837 |
| CDS | 184102 | 184274 |
| CDS | 184436 | 184521 |
| CDS | 184601 | 184703 |
| CDS | 185070 | 185272 |
| CDS | 185357 | 185961 |
| CDS | 186059 | 186173 |
| CDS | 186307 | 186337 |
| CDS | 186908 | 186942 |
| CDS | 187801 | 187883 |
| CDS | 188045 | 188137 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.