PH01001973G0030's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G06700 : 1.00E-159
Blast annotation: Plant protein of unknown function (DUF828)
2.Location
Scaffold: PH01001973
Strand: +
| Region | Start | End |
| gene | 20523 | 26351 |
| mRNA | 20523 | 26351 |
| exon | 20523 | 23512 |
| exon | 23605 | 23797 |
| exon | 23893 | 24086 |
| exon | 24190 | 24348 |
| exon | 24453 | 26351 |
| CDS | 22200 | 23512 |
| CDS | 23605 | 23797 |
| CDS | 23893 | 24086 |
| CDS | 24190 | 24348 |
| CDS | 24453 | 24795 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14416.5 | PMR5N | 383 | 435 |
| PF13839.5 | PC-Esterase | 436 | 722 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.