Gene details

Annotation of co-expression genes

PH01001978G0220's details annotation

1.Annotation

ICBR annotation: formin-like protein 20, putative

Blast result AT5G07740 : 1.00E-129
Blast annotation: actin binding

2.Location

Scaffold: PH01001978
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000461	STE_STE11 (from iTAK) zinc_ion_transmembrane_transport cellular component organization, actin cytoskeleton organization,
coexpression network	CFinderM001542	guanyl-nucleotide exchange factor activity, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity, small GTPase mediated signal transduction, signal transduction, terpenoid biosynthetic process, cellular component organization, Terpenoid_backbone_biosynthesis actin cytoskeleton organization, intracellular,
coexpression network	CFinderM001713	microtubule associated complex, microtubule-based movement, microtubule motor activity, guanyl-nucleotide exchange factor activity, cellular component organization, actin cytoskeleton organization, small GTPase mediated signal transduction,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003779	actin binding
GO:0005515	protein binding
GO:0016043	cellular component organization
GO:0030036	actin cytoskeleton organization

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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