PH01001983G0140's details annotation
1.Annotation
ICBR annotation: auxin-independent growth promoter protein, putative, expressed
Blast result AT5G15740 : 0.00E+00
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01001983
Strand: -
| Region | Start | End |
| gene | 126016 | 129954 |
| mRNA | 126016 | 129954 |
| exon | 126016 | 126464 |
| exon | 126663 | 126820 |
| exon | 126922 | 127126 |
| exon | 127263 | 127552 |
| exon | 127637 | 127802 |
| exon | 127901 | 127989 |
| exon | 128104 | 128171 |
| exon | 129166 | 129954 |
| CDS | 126221 | 126464 |
| CDS | 126663 | 126820 |
| CDS | 126922 | 127126 |
| CDS | 127263 | 127552 |
| CDS | 127637 | 127802 |
| CDS | 127901 | 127989 |
| CDS | 128104 | 128171 |
| CDS | 129166 | 129448 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 102 | 422 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.