PH01002000G0210's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G34320 : 2.00E-148
Blast annotation: Protein of unknown function (DUF668)
2.Location
Scaffold: PH01002000
Strand: +
| Region | Start | End |
| gene | 118877 | 126893 |
| mRNA | 118877 | 126893 |
| exon | 118877 | 120409 |
| exon | 121639 | 121964 |
| exon | 122129 | 122255 |
| exon | 123584 | 123671 |
| exon | 124077 | 124174 |
| exon | 124343 | 124412 |
| exon | 125188 | 125288 |
| exon | 125589 | 125722 |
| exon | 126164 | 126893 |
| CDS | 120101 | 120409 |
| CDS | 121639 | 121964 |
| CDS | 122129 | 122255 |
| CDS | 123584 | 123671 |
| CDS | 124077 | 124174 |
| CDS | 124343 | 124412 |
| CDS | 125188 | 125288 |
| CDS | 125589 | 125722 |
| CDS | 126164 | 126683 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11961.7 | DUF3475 | 155 | 211 |
| PF05003.11 | DUF668 | 353 | 383 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.