PH01002002G0310's details annotation
1.Annotation
ICBR annotation: remorin, putative, expressed
Blast result AT3G57540 : 2.30E-48
Blast annotation: Remorin family protein
2.Location
Scaffold: PH01002002
Strand: -
| Region | Start | End |
| gene | 190951 | 193893 |
| mRNA | 190951 | 193893 |
| exon | 190951 | 192266 |
| exon | 193092 | 193893 |
| CDS | 191985 | 192266 |
| CDS | 193092 | 193721 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000361 | GH3 Glycoside_Hydrolases integral to membrane, lipid transport, Cyanoamino_acid_metabolism Phenylpropanoid_biosynthesis Starch_and_sucrose_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03763.12 | Remorin_C | 164 | 269 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.