PH01002010G0080's details annotation 1.Annotation ICBR annotation: 1,3-beta-glucan synthase component domain containing protein, expressed
Blast result AT5G13000 : 2.00E-134 Blast annotation: glucan synthase-like 12 2.Location Scaffold: PH01002010 Strand: + Region | Start | End | gene | 53817 | 57479 | mRNA | 53817 | 57479 | exon | 53817 | 54522 | exon | 54845 | 54945 | exon | 55365 | 55489 | exon | 55574 | 55667 | exon | 55819 | 55998 | exon | 56032 | 56148 | exon | 56263 | 56355 | exon | 56462 | 56526 | exon | 56680 | 56701 | exon | 56822 | 56914 | exon | 57021 | 57085 | exon | 57239 | 57479 | CDS | 54309 | 54522 | CDS | 54845 | 54945 | CDS | 55365 | 55489 | CDS | 55574 | 55667 | CDS | 55819 | 55998 | CDS | 56032 | 56148 | CDS | 56263 | 56355 | CDS | 56462 | 56526 | CDS | 56680 | 56701 | CDS | 56822 | 56914 | CDS | 57021 | 57085 | CDS | 57239 | 57371 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000826 | dihydrodipicolinate synthase activity, Lysine_biosynthesis lysine biosynthetic process via diaminopimelate, spliceosomal complex, nuclear mRNA splicing, via spliceosome, lyase activity, GT48 GlycosylTransferases C3H Transcription_Regulator(from PlantTFDB) rRNA binding,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | GlycosylTransferases | GT48 |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF04652.15 | Vta1 | 51 | 178 | PF14288.5 | FKS1_dom1 | 402 | 432 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003843 | 1,3-beta-D-glucan synthase activity |
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