PH01002011G0130's details annotation 1.Annotation ICBR annotation: alpha-amylase precursor, putative, expressed
Blast result AT1G69830 : 0.00E+00 Blast annotation: alpha-amylase-like 3 2.Location Scaffold: PH01002011 Strand: - Region | Start | End | gene | 80125 | 93268 | mRNA | 80125 | 93268 | exon | 80125 | 80421 | exon | 80761 | 80898 | exon | 81051 | 81218 | exon | 81666 | 81788 | exon | 82230 | 82479 | exon | 83327 | 83433 | exon | 84458 | 84647 | exon | 85632 | 86263 | exon | 87212 | 87672 | exon | 90173 | 90302 | exon | 90686 | 90805 | exon | 91709 | 91793 | exon | 91865 | 91998 | exon | 92085 | 93268 | CDS | 80362 | 80421 | CDS | 80761 | 80898 | CDS | 81051 | 81218 | CDS | 81666 | 81788 | CDS | 82230 | 82479 | CDS | 83327 | 83433 | CDS | 84458 | 84647 | CDS | 85632 | 86263 | CDS | 87212 | 87672 | CDS | 90173 | 90302 | CDS | 90686 | 90805 | CDS | 91709 | 91793 | CDS | 91865 | 91998 | CDS | 92085 | 92333 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | null | null |
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Carbohydrate-Binding_Modules | CBM45 | Glycoside_Hydrolases | GH13 |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00128.23 | Alpha-amylase | 567 | 823 | PF07821.11 | Alpha-amyl_C2 | 875 | 929 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003824 | catalytic activity | GO:0004556 | alpha-amylase activity | GO:0005509 | calcium ion binding | GO:0005975 | carbohydrate metabolic process | GO:0043169 | cation binding |
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