Annotation of co-expression genes

PH01002017G0380's details annotation

1.Annotation

ICBR annotation: kinesin motor domain containing protein, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01002017
Strand: -

RegionStartEnd
gene271340272355
mRNA271340272355
exon271340271646
exon271778271957
exon272173272355
CDS271560271646
CDS271778271957
CDS272173272355

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000627DNA primase activity,
DNA_replication
coexpression networkCFinderM001248DNA primase activity,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF14746.5WASH-7_C394

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.