PH01002045G0220's details annotation
1.Annotation
ICBR annotation: 14-3-3 protein, putative, expressed
Blast result AT1G26480 : 1.20E-69
Blast annotation: general regulatory factor 12
2.Location
Scaffold: PH01002045
Strand: +
| Region | Start | End |
| gene | 114154 | 119010 |
| mRNA | 114154 | 119010 |
| exon | 114154 | 114331 |
| exon | 116172 | 116478 |
| exon | 116568 | 116714 |
| exon | 116802 | 116867 |
| exon | 117374 | 117522 |
| exon | 118184 | 119010 |
| CDS | 114268 | 114331 |
| CDS | 116172 | 116478 |
| CDS | 116568 | 116714 |
| CDS | 116802 | 116867 |
| CDS | 117374 | 117522 |
| CDS | 118184 | 118347 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00244.19 | 2014/3/3 | 11 | 237 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0019904 | protein domain specific binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.