Gene details

Annotation of co-expression genes

PH01002055G0340's details annotation

1.Annotation

ICBR annotation: LOL3, putative, expressed

Blast result AT1G02170 : 1.20E-79
Blast annotation: metacaspase 1

2.Location

Scaffold: PH01002055
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000200
coexpression network	CFinderM000398	protein neddylation, exocyst, apoplast, cellular protein modification process, exocytosis, Ubiquitin_mediated_proteolysis cysteine-type endopeptidase activity, small protein activating enzyme activity,
coexpression network	CFinderM000651	cysteine-type endopeptidase activity, exocyst, protein disulfide oxidoreductase activity, exocytosis,
coexpression network	CFinderM000664	apoplast, manganese ion binding, cysteine-type endopeptidase activity, nutrient reservoir activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004197	cysteine-type endopeptidase activity
GO:0006508	proteolysis

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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