PH01002061G0050's details annotation
1.Annotation
ICBR annotation: ZOS5-11 - C2H2 zinc finger protein, expressed
Blast result AT3G02860 : 5.60E-45
Blast annotation: zinc ion binding
2.Location
Scaffold: PH01002061
Strand: -
| Region | Start | End |
| gene | 33145 | 39627 |
| mRNA | 33145 | 39627 |
| exon | 33145 | 34719 |
| exon | 34811 | 34857 |
| exon | 34954 | 35029 |
| exon | 35566 | 36019 |
| exon | 36832 | 36985 |
| exon | 37803 | 37902 |
| exon | 38536 | 39627 |
| CDS | 34536 | 34719 |
| CDS | 34811 | 34857 |
| CDS | 34954 | 35029 |
| CDS | 35566 | 36019 |
| CDS | 36832 | 36985 |
| CDS | 37803 | 37902 |
| CDS | 38536 | 38621 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000389 | protein folding, response to heat, unfolded protein binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.