PH01002075G0180's details annotation
1.Annotation
ICBR annotation: uncharacterized Cys-rich domain containing protein, putative, expressed
Blast result AT1G68610 : 5.40E-45
Blast annotation: PLANT CADMIUM RESISTANCE 11
2.Location
Scaffold: PH01002075
Strand: +
| Region | Start | End |
| gene | 128925 | 132631 |
| mRNA | 128925 | 132631 |
| exon | 128925 | 129388 |
| exon | 130010 | 130099 |
| exon | 130665 | 130843 |
| exon | 130950 | 131021 |
| exon | 131133 | 131354 |
| exon | 132125 | 132631 |
| CDS | 129255 | 129388 |
| CDS | 130010 | 130099 |
| CDS | 130665 | 130843 |
| CDS | 130950 | 131021 |
| CDS | 131133 | 131354 |
| CDS | 132125 | 132204 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04749.16 | PLAC8 | 121 | 222 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.