PH01002135G0340's details annotation
1.Annotation
ICBR annotation: histone-lysine N-methyltransferase, putative, expressed
Blast result AT2G35160 : 3.90E-85
Blast annotation: SU(VAR)3-9 homolog 5
2.Location
Scaffold: PH01002135
Strand: +
| Region | Start | End |
| gene | 234529 | 238971 |
| mRNA | 234529 | 238971 |
| exon | 234529 | 236553 |
| exon | 236669 | 237490 |
| exon | 237716 | 238971 |
| CDS | 236260 | 236553 |
| CDS | 236669 | 237490 |
| CDS | 237716 | 238945 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02182.16 | SAD_SRA | 513 | 668 |
| PF05033.15 | Pre-SET | 693 | 781 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005634 | nucleus |
| GO:0008270 | zinc ion binding |
| GO:0018024 | histone-lysine N-methyltransferase activity |
| GO:0034968 | histone lysine methylation |
| GO:0042393 | histone binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.