PH01002158G0430's details annotation
1.Annotation
ICBR annotation: endonuclease/exonuclease/phosphatase family domain containing protein, expressed
Blast result AT1G71710 : 1.00E-127
Blast annotation: DNAse I-like superfamily protein
2.Location
Scaffold: PH01002158
Strand: -
| Region | Start | End |
| gene | 245305 | 253122 |
| mRNA | 245305 | 253122 |
| exon | 245305 | 246374 |
| exon | 246613 | 246755 |
| exon | 246826 | 246934 |
| exon | 247318 | 247502 |
| exon | 247887 | 248613 |
| exon | 248811 | 248886 |
| exon | 250544 | 250676 |
| exon | 250782 | 253122 |
| CDS | 246146 | 246374 |
| CDS | 246613 | 246755 |
| CDS | 246826 | 246934 |
| CDS | 247318 | 247502 |
| CDS | 247887 | 248613 |
| CDS | 248811 | 248886 |
| CDS | 250544 | 250676 |
| CDS | 250782 | 250841 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0046856 | phosphatidylinositol dephosphorylation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.