PH01002183G0170's details annotation
1.Annotation
ICBR annotation: OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK
Blast result AT2G47060 : 4.30E-99
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01002183
Strand: -
| Region | Start | End |
| gene | 80619 | 87794 |
| mRNA | 80619 | 87794 |
| exon | 80619 | 82002 |
| exon | 85219 | 85351 |
| exon | 85426 | 85696 |
| exon | 85821 | 85947 |
| exon | 86018 | 86064 |
| exon | 86108 | 87794 |
| CDS | 81049 | 82002 |
| CDS | 85219 | 85351 |
| CDS | 85426 | 85696 |
| CDS | 85821 | 85947 |
| CDS | 86018 | 86064 |
| CDS | 86108 | 87332 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 45 | 301 |
| PF07714.16 | Pkinase_Tyr | 392 | 589 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.