PH01002214G0260's details annotation
1.Annotation
ICBR annotation: SWIB/MDM2 domain containing protein, expressed
Blast result AT5G14170 : 1.60E-35
Blast annotation: SWIB/MDM2 domain superfamily protein
2.Location
Scaffold: PH01002214
Strand: +
| Region | Start | End |
| gene | 198618 | 210407 |
| mRNA | 198618 | 210407 |
| exon | 198618 | 199421 |
| exon | 199500 | 199618 |
| exon | 199734 | 199968 |
| exon | 202085 | 202142 |
| exon | 203398 | 203848 |
| exon | 209899 | 210407 |
| CDS | 199376 | 199421 |
| CDS | 199500 | 199618 |
| CDS | 199734 | 199968 |
| CDS | 202085 | 202142 |
| CDS | 203398 | 203848 |
| CDS | 209899 | 210402 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.