PH01002251G0250's details annotation
1.Annotation
ICBR annotation: enolase, putative, expressed
Blast result AT2G36530 : 0.00E+00
Blast annotation: Enolase
2.Location
Scaffold: PH01002251
Strand: +
| Region | Start | End |
| gene | 178000 | 183170 |
| mRNA | 178000 | 183170 |
| exon | 178000 | 178177 |
| exon | 178897 | 178960 |
| exon | 179029 | 179064 |
| exon | 179122 | 179186 |
| exon | 179956 | 180003 |
| exon | 180089 | 180175 |
| exon | 180281 | 180361 |
| exon | 180632 | 180712 |
| exon | 180796 | 180870 |
| exon | 181051 | 181113 |
| exon | 181197 | 181277 |
| exon | 181358 | 181552 |
| exon | 181637 | 181687 |
| exon | 181790 | 181878 |
| exon | 181969 | 182020 |
| exon | 182958 | 183170 |
| CDS | 178109 | 178177 |
| CDS | 178897 | 178960 |
| CDS | 179029 | 179064 |
| CDS | 179122 | 179186 |
| CDS | 179956 | 180003 |
| CDS | 180089 | 180175 |
| CDS | 180281 | 180361 |
| CDS | 180632 | 180712 |
| CDS | 180796 | 180870 |
| CDS | 181051 | 181113 |
| CDS | 181197 | 181277 |
| CDS | 181358 | 181552 |
| CDS | 181637 | 181687 |
| CDS | 181790 | 181878 |
| CDS | 181969 | 182020 |
| CDS | 182958 | 183038 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000111 | protein insertion into membrane, ATP citrate synthase activity, succinate-CoA ligase (ADP-forming) activity, regulation_of_anion_transport voltage-gated anion channel activity, anion transport, |
| coexpression network | CFinderM000712 | anion transport, regulation_of_anion_transport protein insertion into membrane, mitochondrial outer membrane, phosphopyruvate hydratase complex, voltage-gated anion channel activity, phosphopyruvate hydratase activity, |
| coexpression network | CFinderM001834 | phosphopyruvate hydratase complex, TAZ Transcription_Regulator(from iTAK) L-malate dehydrogenase activity, transcription cofactor activity, malate dehydrogenase activity, phosphopyruvate hydratase activity, histone acetyltransferase activity, malate metabolic process, cellular carbohydrate metabolic process, MYB-related Transcription_Regulator(from iTAK) MYB_related Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03952.15 | Enolase_N | 5 | 140 |
| PF00113.21 | Enolase_C | 149 | 441 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | enolase [EC:4.2.1.11] | ko00010 | K01689 |
| Methane metabolism | enolase [EC:4.2.1.11] | ko00680 | K01689 |
| RNA degradation | enolase [EC:4.2.1.11] | ko03018 | K01689 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000015 | phosphopyruvate hydratase complex |
| GO:0000287 | magnesium ion binding |
| GO:0004634 | phosphopyruvate hydratase activity |
| GO:0006096 | glycolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.