PH01002255G0390's details annotation
1.Annotation
ICBR annotation: transporter family protein, putative, expressed
Blast result AT1G61800 : 2.00E-145
Blast annotation: glucose-6-phosphate/phosphate translocator 2
2.Location
Scaffold: PH01002255
Strand: +
| Region | Start | End |
| gene | 222725 | 225222 |
| mRNA | 222725 | 225222 |
| exon | 222725 | 223315 |
| exon | 223433 | 223658 |
| exon | 224045 | 224267 |
| exon | 224683 | 224896 |
| exon | 224993 | 225222 |
| CDS | 223241 | 223315 |
| CDS | 223433 | 223658 |
| CDS | 224045 | 224267 |
| CDS | 224683 | 224896 |
| CDS | 224993 | 225004 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03151.15 | TPT | 93 | 381 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005215 | transporter activity |
| GO:0006810 | transport |
| GO:0016020 | membrane |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.