PH01002291G0060's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G24330 : 7.70E-54
Blast annotation: Protein of unknown function (DUF2296)
2.Location
Scaffold: PH01002291
Strand: -
| Region | Start | End |
| gene | 31697 | 33916 |
| mRNA | 31697 | 33916 |
| exon | 31697 | 32553 |
| exon | 32644 | 33064 |
| exon | 33151 | 33260 |
| exon | 33816 | 33916 |
| CDS | 32306 | 32553 |
| CDS | 32644 | 33064 |
| CDS | 33151 | 33260 |
| CDS | 33816 | 33840 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10058.8 | zinc_ribbon_10 | 157 | 207 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.