PH01002293G0110's details annotation
1.Annotation
ICBR annotation: pantoate--beta-alanine ligase, putative, expressed
Blast result AT5G48840 : 2.50E-45
Blast annotation: homolog of bacterial PANC
2.Location
Scaffold: PH01002293
Strand: -
| Region | Start | End |
| gene | 63226 | 65570 |
| mRNA | 63226 | 65570 |
| exon | 63226 | 65570 |
| CDS | 63403 | 63855 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02569.14 | Pantoate_ligase | 1 | 150 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| beta-Alanine metabolism | pantoate--beta-alanine ligase [EC:6.3.2.1] | ko00410 | K01918 |
| Pantothenate and CoA biosynthesis | pantoate--beta-alanine ligase [EC:6.3.2.1] | ko00770 | K01918 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004592 | pantoate-beta-alanine ligase activity |
| GO:0015940 | pantothenate biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.