PH01002309G0020's details annotation
1.Annotation
ICBR annotation: estradiol 17-beta-dehydrogenase 12, putative, expressed
Blast result AT1G24470 : 8.50E-28
Blast annotation: beta-ketoacyl reductase 2
2.Location
Scaffold: PH01002309
Strand: -
| Region | Start | End |
| gene | 8683 | 13192 |
| mRNA | 8683 | 13192 |
| exon | 8683 | 8967 |
| exon | 9513 | 9582 |
| exon | 11329 | 11507 |
| exon | 11550 | 11615 |
| exon | 11713 | 13192 |
| CDS | 8710 | 8967 |
| CDS | 9513 | 9582 |
| CDS | 11329 | 11507 |
| CDS | 11550 | 11615 |
| CDS | 11713 | 11772 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000310 | Glycine,_serine_and_threonine_metabolism flavin adenine dinucleotide binding, oxidoreductase activity, acting on CH-OH group of donors, Biotin_metabolism oxidation-reduction process, alcohol metabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.