PH01002324G0370's details annotation
1.Annotation
ICBR annotation: kinase, pfkB family, putative, expressed
Blast result AT4G28706 : 9.80E-88
Blast annotation: pfkB-like carbohydrate kinase family protein
2.Location
Scaffold: PH01002324
Strand: -
| Region | Start | End |
| gene | 213093 | 220368 |
| mRNA | 213093 | 220368 |
| exon | 213093 | 214089 |
| exon | 215252 | 215378 |
| exon | 216103 | 216213 |
| exon | 216565 | 216715 |
| exon | 217041 | 217093 |
| exon | 217205 | 217279 |
| exon | 217438 | 217583 |
| exon | 219229 | 219520 |
| exon | 219558 | 220368 |
| CDS | 213458 | 214089 |
| CDS | 215252 | 215378 |
| CDS | 216103 | 216213 |
| CDS | 216565 | 216715 |
| CDS | 217041 | 217093 |
| CDS | 217205 | 217279 |
| CDS | 217438 | 217583 |
| CDS | 219229 | 219520 |
| CDS | 219558 | 220070 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00294.23 | PfkB | 264 | 494 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.