PH01002346G0120's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
Blast result AT3G22060 : 2.30E-35
Blast annotation: Receptor-like protein kinase-related family protein
2.Location
Scaffold: PH01002346
Strand: +
| Region | Start | End |
| gene | 57225 | 60744 |
| mRNA | 57225 | 60744 |
| exon | 57225 | 58426 |
| exon | 58770 | 59007 |
| exon | 59248 | 59279 |
| exon | 59483 | 60744 |
| CDS | 57562 | 58426 |
| CDS | 58770 | 59007 |
| CDS | 59248 | 59279 |
| CDS | 59483 | 59616 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01657.16 | Stress-antifung | 46 | 143 |
| PF01657.16 | Stress-antifung | 167 | 259 |
| PF00069.24 | Pkinase | 303 | 375 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.