PH01002433G0310's details annotation
1.Annotation
ICBR annotation: receptor-like protein kinase 2 precursor, putative, expressed
Blast result AT1G34420 : 2.60E-81
Blast annotation: leucine-rich repeat transmembrane protein kinase family protein
2.Location
Scaffold: PH01002433
Strand: -
| Region | Start | End |
| gene | 189963 | 195184 |
| mRNA | 189963 | 195184 |
| exon | 189963 | 190099 |
| exon | 190226 | 190307 |
| exon | 190998 | 191035 |
| exon | 191844 | 191960 |
| exon | 192470 | 192597 |
| exon | 192713 | 193229 |
| exon | 193261 | 193878 |
| exon | 194200 | 195184 |
| CDS | 190047 | 190099 |
| CDS | 190226 | 190307 |
| CDS | 190998 | 191035 |
| CDS | 191844 | 191960 |
| CDS | 192470 | 192597 |
| CDS | 192713 | 193229 |
| CDS | 193261 | 193878 |
| CDS | 194200 | 194503 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13855.5 | LRR_8 | 107 | 166 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.