PH01002454G0090's details annotation
1.Annotation
ICBR annotation: esterase/lipase/thioesterase, putative, expressed
Blast result AT3G27325 : 0.00E+00
Blast annotation: hydrolases, acting on ester bonds
2.Location
Scaffold: PH01002454
Strand: +
| Region | Start | End |
| gene | 63754 | 73433 |
| mRNA | 63754 | 73433 |
| exon | 63754 | 64802 |
| exon | 65334 | 65570 |
| exon | 65892 | 66082 |
| exon | 66210 | 66369 |
| exon | 67020 | 67175 |
| exon | 67285 | 67471 |
| exon | 68109 | 68254 |
| exon | 68417 | 68599 |
| exon | 70770 | 70880 |
| exon | 71160 | 71233 |
| exon | 71627 | 71753 |
| exon | 71847 | 71991 |
| exon | 72324 | 72527 |
| exon | 72691 | 73433 |
| CDS | 64512 | 64802 |
| CDS | 65334 | 65570 |
| CDS | 65892 | 66082 |
| CDS | 66210 | 66369 |
| CDS | 67020 | 67175 |
| CDS | 67285 | 67471 |
| CDS | 68109 | 68254 |
| CDS | 68417 | 68599 |
| CDS | 70770 | 70880 |
| CDS | 71160 | 71233 |
| CDS | 71627 | 71753 |
| CDS | 71847 | 71991 |
| CDS | 72324 | 72527 |
| CDS | 72691 | 72797 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07819.12 | PGAP1 | 80 | 300 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006505 | GPI anchor metabolic process |
| GO:0006886 | intracellular protein transport |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.