PH01002461G0060's details annotation
1.Annotation
ICBR annotation: lecithine cholesterol acyltransferase, putative, expressed
Blast result AT3G03310 : 2.90E-12
Blast annotation: lecithin:cholesterol acyltransferase 3
2.Location
Scaffold: PH01002461
Strand: -
| Region | Start | End |
| gene | 21873 | 26573 |
| mRNA | 21873 | 26573 |
| exon | 21873 | 24069 |
| exon | 25308 | 25409 |
| exon | 25646 | 25699 |
| exon | 25788 | 26573 |
| CDS | 23599 | 24069 |
| CDS | 25308 | 25409 |
| CDS | 25646 | 25699 |
| CDS | 25788 | 25790 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
| GO:0008374 | O-acyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.