PH01002472G0200's details annotation
1.Annotation
ICBR annotation: galactosyltransferase family protein, putative, expressed
Blast result AT1G26810 : 4.00E-143
Blast annotation: galactosyltransferase1
2.Location
Scaffold: PH01002472
Strand: +
| Region | Start | End |
| gene | 130700 | 134743 |
| mRNA | 130700 | 134743 |
| exon | 130700 | 132146 |
| exon | 132536 | 132771 |
| exon | 133004 | 133285 |
| exon | 133911 | 134090 |
| exon | 134352 | 134743 |
| CDS | 131378 | 132146 |
| CDS | 132536 | 132771 |
| CDS | 133004 | 133285 |
| CDS | 133911 | 134090 |
| CDS | 134352 | 134597 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00337.21 | Gal-bind_lectin | 164 | 356 |
| PF01762.20 | Galactosyl_T | 434 | 489 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Various types of N-glycan biosynthesis | beta-1,3-galactosyltransferase [EC:2.4.1.-] | ko00513 | K14413 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0030246 | carbohydrate binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.