PH01002482G0220's details annotation 1.Annotation ICBR annotation: PFT1, putative, expressed
Blast result AT1G25540 : 3.00E-157 Blast annotation: phytochrome and flowering time regulatory protein (PFT1) 2.Location Scaffold: PH01002482 Strand: - Region | Start | End | gene | 178350 | 192961 | mRNA | 178350 | 192961 | exon | 178350 | 179219 | exon | 179348 | 179434 | exon | 179561 | 179645 | exon | 181724 | 181752 | exon | 182541 | 182594 | exon | 185044 | 185832 | exon | 185921 | 185979 | exon | 188075 | 188267 | exon | 188863 | 188928 | exon | 189035 | 189244 | exon | 190266 | 190396 | exon | 190522 | 190585 | exon | 190684 | 190714 | exon | 192469 | 192961 | CDS | 178647 | 179219 | CDS | 179348 | 179434 | CDS | 179561 | 179645 | CDS | 181724 | 181752 | CDS | 182541 | 182594 | CDS | 185044 | 185832 | CDS | 185921 | 185979 | CDS | 188075 | 188267 | CDS | 188863 | 188928 | CDS | 189035 | 189244 | CDS | 190266 | 190396 | CDS | 190522 | 190585 | CDS | 190684 | 190714 | CDS | 192469 | 192569 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000569 | CMGC_Pl-Tthe (from iTAK) 1,3-beta-D-glucan synthase activity, 1,3-beta-D-glucan synthase complex, membrane, Regulation_of_autophagy
| coexpression network | CFinderM000779 | spliceosomal complex, nuclear mRNA splicing, via spliceosome, Spliceosome
| coexpression network | CFinderM001680 | COPII_vesicle_coating SET Transcription_Regulator(from iTAK) potassium_ion_transmembrane_transport
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF11265.7 | Med25_VWA | 4 | 227 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | null | null |
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