PH01002495G0070's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01002495
Strand: -
| Region | Start | End |
| gene | 52188 | 55884 |
| mRNA | 52188 | 55884 |
| exon | 52188 | 53237 |
| exon | 53455 | 53510 |
| exon | 53602 | 53697 |
| exon | 53775 | 54072 |
| exon | 54459 | 54517 |
| exon | 54593 | 54718 |
| exon | 54808 | 55008 |
| exon | 55109 | 55173 |
| exon | 55355 | 55451 |
| exon | 55561 | 55884 |
| CDS | 53099 | 53237 |
| CDS | 53455 | 53510 |
| CDS | 53602 | 53697 |
| CDS | 53775 | 54072 |
| CDS | 54459 | 54517 |
| CDS | 54593 | 54718 |
| CDS | 54808 | 55008 |
| CDS | 55109 | 55173 |
| CDS | 55355 | 55451 |
| CDS | 55561 | 55566 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00004.28 | AAA | 68 | 183 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.