PH01002534G0170's details annotation
1.Annotation
ICBR annotation: SHR5-receptor-like kinase, putative
Blast result AT1G56130 : 1.40E-26
Blast annotation: Leucine-rich repeat transmembrane protein kinase
2.Location
Scaffold: PH01002534
Strand: -
| Region | Start | End |
| gene | 148361 | 149713 |
| mRNA | 148361 | 149713 |
| exon | 148361 | 149271 |
| exon | 149391 | 149486 |
| exon | 149665 | 149713 |
| CDS | 149005 | 149271 |
| CDS | 149391 | 149486 |
| CDS | 149665 | 149667 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.