PH01002537G0060's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G27560 : 9.30E-81
Blast annotation: Domain of unknown function (DUF1995)
2.Location
Scaffold: PH01002537
Strand: +
| Region | Start | End |
| gene | 21725 | 25570 |
| mRNA | 21725 | 25570 |
| exon | 21725 | 22121 |
| exon | 22219 | 22306 |
| exon | 22504 | 22614 |
| exon | 22817 | 22899 |
| exon | 23470 | 23584 |
| exon | 23986 | 24077 |
| exon | 24577 | 24670 |
| exon | 24734 | 24778 |
| exon | 25054 | 25570 |
| CDS | 21877 | 22121 |
| CDS | 22219 | 22306 |
| CDS | 22504 | 22614 |
| CDS | 22817 | 22899 |
| CDS | 23470 | 23584 |
| CDS | 23986 | 24077 |
| CDS | 24577 | 24670 |
| CDS | 24734 | 24778 |
| CDS | 25054 | 25164 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09353.9 | DUF1995 | 85 | 251 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.