PH01002584G0010's details annotation
1.Annotation
ICBR annotation: endonuclease/exonuclease/phosphatase family domain containing protein, expressed
Blast result AT2G43900 : 3.00E-105
Blast annotation: Endonuclease/exonuclease/phosphatase family protein
2.Location
Scaffold: PH01002584
Strand: +
| Region | Start | End |
| gene | 457 | 5970 |
| mRNA | 457 | 5970 |
| exon | 457 | 720 |
| exon | 819 | 856 |
| exon | 957 | 1167 |
| exon | 1371 | 1494 |
| exon | 1611 | 1971 |
| exon | 3050 | 3212 |
| exon | 3472 | 5970 |
| CDS | 690 | 720 |
| CDS | 819 | 856 |
| CDS | 957 | 1167 |
| CDS | 1371 | 1494 |
| CDS | 1611 | 1971 |
| CDS | 3050 | 3212 |
| CDS | 3472 | 3584 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03372.22 | Exo_endo_phos | 37 | 147 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0046856 | phosphatidylinositol dephosphorylation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.