PH01002594G0280's details annotation
1.Annotation
ICBR annotation: bet v I allergen family protein, putative
Blast result AT2G26040 : 1.30E-60
Blast annotation: PYR1-like 2
2.Location
Scaffold: PH01002594
Strand: -
| Region | Start | End |
| gene | 162755 | 163548 |
| mRNA | 162755 | 163548 |
| exon | 162755 | 163548 |
| CDS | 162844 | 163446 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000188 | ubiquitin-dependent protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10604.8 | Polyketide_cyc2 | 44 | 183 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.