PH01002601G0250's details annotation
1.Annotation
ICBR annotation: nucleotide-binding protein-like, putative, expressed
Blast result AT4G19540 : 1.30E-68
Blast annotation: INDH1(iron-sulfur protein required for NADH dehydrogenase)
2.Location
Scaffold: PH01002601
Strand: -
| Region | Start | End |
| gene | 169996 | 174055 |
| mRNA | 169996 | 174055 |
| exon | 169996 | 170699 |
| exon | 170732 | 170909 |
| exon | 171601 | 171698 |
| exon | 172783 | 172905 |
| exon | 173347 | 173470 |
| exon | 173633 | 174055 |
| CDS | 170599 | 170699 |
| CDS | 170732 | 170909 |
| CDS | 171601 | 171698 |
| CDS | 172783 | 172905 |
| CDS | 173347 | 173470 |
| CDS | 173633 | 173656 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10609.8 | ParA | 30 | 214 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.