PH01002634G0120's details annotation
1.Annotation
ICBR annotation: IQ calmodulin-binding motif domain containing protein, expressed
Blast result AT3G22190 : 4.00E-48
Blast annotation: IQ-domain 5
2.Location
Scaffold: PH01002634
Strand: -
| Region | Start | End |
| gene | 70363 | 76783 |
| mRNA | 70363 | 76783 |
| exon | 70363 | 71293 |
| exon | 71968 | 72252 |
| exon | 72833 | 72946 |
| exon | 73504 | 73512 |
| exon | 73595 | 73822 |
| exon | 74287 | 74517 |
| exon | 75652 | 76783 |
| CDS | 71249 | 71293 |
| CDS | 71968 | 72252 |
| CDS | 72833 | 72946 |
| CDS | 73504 | 73512 |
| CDS | 73595 | 73822 |
| CDS | 74287 | 74517 |
| CDS | 75652 | 75762 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00612.26 | IQ | 102 | 120 |
| PF00612.26 | IQ | 123 | 140 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.