PH01002656G0050's details annotation
1.Annotation
ICBR annotation: homocysteine S-methyltransferase protein, putative, expressed
Blast result AT3G25900 : 1.90E-51
Blast annotation: Homocysteine S-methyltransferase family protein
2.Location
Scaffold: PH01002656
Strand: -
| Region | Start | End |
| gene | 46939 | 49080 |
| mRNA | 46939 | 49080 |
| exon | 46939 | 47242 |
| exon | 47383 | 47439 |
| exon | 48309 | 49080 |
| CDS | 47033 | 47242 |
| CDS | 47383 | 47439 |
| CDS | 48309 | 48467 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02574.15 | S-methyl_trans | 18 | 137 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008898 | homocysteine S-methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.