PH01002664G0050's details annotation
1.Annotation
ICBR annotation: domain of unknown function, DUF250 domain containing protein, expressed
Blast result AT3G17430 : 2.00E-147
Blast annotation: Nucleotide-sugar transporter family protein
2.Location
Scaffold: PH01002664
Strand: -
| Region | Start | End |
| gene | 24003 | 30728 |
| mRNA | 24003 | 30728 |
| exon | 24003 | 24760 |
| exon | 25694 | 25788 |
| exon | 25918 | 26183 |
| exon | 27989 | 28250 |
| exon | 28360 | 28421 |
| exon | 29112 | 29162 |
| exon | 29236 | 29267 |
| exon | 29528 | 29635 |
| exon | 30131 | 30728 |
| CDS | 24584 | 24760 |
| CDS | 25694 | 25788 |
| CDS | 25918 | 26183 |
| CDS | 27989 | 28250 |
| CDS | 28360 | 28421 |
| CDS | 29112 | 29162 |
| CDS | 29236 | 29267 |
| CDS | 29528 | 29635 |
| CDS | 30131 | 30250 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03151.15 | TPT | 49 | 309 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.