PH01002698G0150's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G55540 : 0.00E+00
Blast annotation: tornado 1
2.Location
Scaffold: PH01002698
Strand: -
| Region | Start | End |
| gene | 96068 | 101588 |
| mRNA | 96068 | 101588 |
| exon | 96068 | 97796 |
| exon | 97918 | 99146 |
| exon | 99910 | 101588 |
| CDS | 96414 | 97796 |
| CDS | 97918 | 99146 |
| CDS | 99910 | 101467 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13516.5 | LRR_6 | 334 | 356 |
| PF16095.4 | COR | 738 | 936 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.