PH01002703G0160's details annotation
1.Annotation
ICBR annotation: CCB4, putative, expressed
Blast result AT1G59840 : 4.80E-40
Blast annotation: cofactor assembly of complex C
2.Location
Scaffold: PH01002703
Strand: -
| Region | Start | End |
| gene | 98219 | 101803 |
| mRNA | 98219 | 101803 |
| exon | 98219 | 98312 |
| exon | 98397 | 98480 |
| exon | 98728 | 98798 |
| exon | 98870 | 99051 |
| exon | 99982 | 100157 |
| exon | 100576 | 100613 |
| exon | 101491 | 101803 |
| CDS | 98271 | 98312 |
| CDS | 98397 | 98480 |
| CDS | 98728 | 98798 |
| CDS | 98870 | 99051 |
| CDS | 99982 | 100157 |
| CDS | 100576 | 100613 |
| CDS | 101491 | 101695 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11152.7 | CCB2_CCB4 | 141 | 252 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.