PH01002755G0020's details annotation
1.Annotation
ICBR annotation: nitric oxide synthase 1, putative, expressed
Blast result AT3G47450 : 8.50E-32
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01002755
Strand: -
| Region | Start | End |
| gene | 7892 | 16012 |
| mRNA | 7892 | 16012 |
| exon | 7892 | 8618 |
| exon | 9630 | 9688 |
| exon | 9798 | 9862 |
| exon | 10982 | 11054 |
| exon | 11112 | 11189 |
| exon | 11372 | 11438 |
| exon | 11523 | 11849 |
| exon | 13061 | 13118 |
| exon | 13362 | 13471 |
| exon | 13942 | 14031 |
| exon | 14131 | 14205 |
| exon | 14746 | 16012 |
| CDS | 8529 | 8618 |
| CDS | 9630 | 9688 |
| CDS | 9798 | 9862 |
| CDS | 10982 | 11054 |
| CDS | 11112 | 11189 |
| CDS | 11372 | 11438 |
| CDS | 11523 | 11849 |
| CDS | 13061 | 13118 |
| CDS | 13362 | 13471 |
| CDS | 13942 | 14031 |
| CDS | 14131 | 14205 |
| CDS | 14746 | 14859 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.