PH01002772G0130's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G29790 : 3.00E-128
Blast annotation: -
2.Location
Scaffold: PH01002772
Strand: +
| Region | Start | End |
| gene | 87127 | 97832 |
| mRNA | 87127 | 97832 |
| exon | 87127 | 87865 |
| exon | 88032 | 88074 |
| exon | 88845 | 89143 |
| exon | 89422 | 89601 |
| exon | 89781 | 90518 |
| exon | 90596 | 90690 |
| exon | 90914 | 91002 |
| exon | 91099 | 91164 |
| exon | 91374 | 91925 |
| exon | 92794 | 92868 |
| exon | 93005 | 93075 |
| exon | 93162 | 93219 |
| exon | 96483 | 96684 |
| exon | 96875 | 97832 |
| CDS | 87471 | 87865 |
| CDS | 88032 | 88074 |
| CDS | 88845 | 89143 |
| CDS | 89422 | 89601 |
| CDS | 89781 | 90518 |
| CDS | 90596 | 90690 |
| CDS | 90914 | 91002 |
| CDS | 91099 | 91164 |
| CDS | 91374 | 91925 |
| CDS | 92794 | 92868 |
| CDS | 93005 | 93075 |
| CDS | 93162 | 93219 |
| CDS | 96483 | 96684 |
| CDS | 96875 | 97512 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.