Annotation of co-expression genes

PH01002798G0030's details annotation

1.Annotation

ICBR annotation: UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01002798
Strand: -

RegionStartEnd
gene1624917914
mRNA1624917914
exon1624916503
exon1671517914
CDS1633916503
CDS1671516840

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000582membrane,
GT8 GlycosylTransferases

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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