PH01002845G0020's details annotation
1.Annotation
ICBR annotation: MORN repeat domain containing protein, expressed
Blast result AT1G21920 : 6.00E-106
Blast annotation: Histone H3 K4-specific methyltransferase SET7/9 family protein
2.Location
Scaffold: PH01002845
Strand: +
| Region | Start | End |
| gene | 4275 | 10215 |
| mRNA | 4275 | 10215 |
| exon | 4275 | 4536 |
| exon | 4634 | 4709 |
| exon | 6261 | 6688 |
| exon | 6853 | 7081 |
| exon | 7175 | 7333 |
| exon | 8924 | 8979 |
| exon | 9841 | 9925 |
| exon | 10048 | 10215 |
| CDS | 4505 | 4536 |
| CDS | 4634 | 4709 |
| CDS | 6261 | 6688 |
| CDS | 6853 | 7081 |
| CDS | 7175 | 7333 |
| CDS | 8924 | 8979 |
| CDS | 9841 | 9925 |
| CDS | 10048 | 10101 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02493.19 | MORN | 75 | 90 |
| PF02493.19 | MORN | 98 | 120 |
| PF02493.19 | MORN | 138 | 159 |
| PF02493.19 | MORN | 161 | 183 |
| PF02493.19 | MORN | 184 | 205 |
| PF02493.19 | MORN | 207 | 228 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.